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TEACHING

University Courses and Other teaching

Director, MSc in Computational Biomedicine, Imperial College London, 2023 - current

Lecturer & Module lead, MSc in Applied Genomics, Imperial College London, 2022 - current

Guest Lecturer - MSc Human Molecular Genetics -2024

Internal Examiner & Research Supervisor, BSc in Medical Bioscience, Imperial College London, 2024 - current

Internal Examiner, MSc in Biomedical Research, Imperial College London, 2022 - current

Lecturer, MPhil degree program in Computational Biology, University of Cambridge, 2014 - 2022

Co-organiser & Instructor, CRUK Summer/Autumn School in Computational Biology and Bioinformatics 2015 - 2021

Instructor, CamBioScience Data Analysis Week, 2020

Lecturer, Cambridge Institute of Continuing Education short course "Epigenetics: more than just our genes" 2019

Instructor, Genome Informatics course at the CRUK Cambridge Institute 2014 - 2017

Instructor, Analysis of regulatory genomic sequencing data, Graduate School of Life Sciences Bioinformatics Training, University of Cambridge, 2016

Co-organiser - Cambridge Area Sequencing Informatics Meeting (CASIM) computational reproducibility workshop 2015

Analysis of High-throughput sequencing data with Bioconductor,  Graduate School of Life Sciences Bioinformatics Training, University of Cambridge 2013 - 2016

RESEARCH Supervision

Ph.D:

Izzy Newsham, MRC doctoral training award Ph.D student in Data Science for early detection and predictive network modelling of disease 2020 - current

Liviu Pirvan, MRC doctoral training award Ph.D student in Artificial Intelligence for regulatory genomics,  2018 - 23

Shoko Hirosue (co-supervision with Dr Sakari Vanharanta) MB/Ph.D student in Cancer Biology and Bioinformatics, 2018 - 23

Joanna Krupka Cambridge Cancer Centre Clinical Research Fellowship Ph.D. student in Systems Biology, 2017 - 21 

Ioana Olan (co-supervision with Prof Masashi Narita) Wellcome Trust Mathematical Genomics in Medicine Ph.D. student in Computational & Systems Biology, 2015 - 18

 

Masters:

MSc Applied Genomics research students ICL (Katie Taylor, Sathvik Satish and James Spurrier), 2024

MSc Applied Genomics research student ICL (Levia Yee), 2023

M.Phil Computational Biology research student, (Matthew Greenig) U of Cambridge 2021

M.Phil Genomic Medicine research student, (Maria Torra) U of Cambridge 2021

M.Sc Biotechnology research student, (Niklas Müller-Bötticher) ETH Zurich 2020

M.Phil Genomic Medicine research student, (Elsita Jungkurth) U of Cambridge 2020

M.Phil Computational Biology research student, (Laura Martens) U of Cambridge 2019

M.Phil Genomic Medicine research student, (Natalia Pardo Lorente) U of Cambirdge2018-19

M.Eng Information Engineering research student, (Vivian Wong Kah Ong) U of Cambridge 2018

M.Phil Computational Biology research student, (Dilyana Mincheva) U of Cambridge 2015

Interns:

Summer research interns in Data Science, 2015 - 21

Medicine SSC research students, 2018

Summer research students in Computational Systems Biology, University of Cambridge, 2014 - 15

Wellcome Trust Mathematical Genomics in Medicine Ph.D. program rotations, 2015 

Supervision of students in BIO21 UROP program in Bioinformatics, Monash University, Australia. 2006 - 08

Mentoring

Personal Tutor for 5 masters students, Imperial College 2022- 23; 2023-24

Postdocs and early career researchers - University of Cambridge, School of Clinical Medicine Mentor Programme 2016 - 18

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