TEACHING
University Courses and Other teaching
Director, MSc in Computational Biomedicine, Imperial College London, 2023 - current
Lecturer & Module lead, MSc in Applied Genomics, Imperial College London, 2022 - current
Guest Lecturer - MSc Human Molecular Genetics -2024
Internal Examiner, MSc in Biomedical Research, Imperial College London, 2022 - current
Lecturer, MPhil degree program in Computational Biology, University of Cambridge, 2014 - 2022
Instructor, CamBioScience Data Analysis Week, 2020
Lecturer, Cambridge Institute of Continuing Education short course "Epigenetics: more than just our genes" 2019
Instructor, Genome Informatics course at the CRUK Cambridge Institute 2014 - 2017
Instructor, Analysis of regulatory genomic sequencing data, Graduate School of Life Sciences Bioinformatics Training, University of Cambridge, 2016
Co-organiser - Cambridge Area Sequencing Informatics Meeting (CASIM) computational reproducibility workshop 2015
Analysis of High-throughput sequencing data with Bioconductor, Graduate School of Life Sciences Bioinformatics Training, University of Cambridge 2013 - 2016
RESEARCH Supervision
Ph.D:
Izzy Newsham, MRC doctoral training award Ph.D student in Data Science for early detection and predictive network modelling of disease 2020 - current
Liviu Pirvan, MRC doctoral training award Ph.D student in Artificial Intelligence for regulatory genomics, 2018 - 23
Shoko Hirosue (co-supervision with Dr Sakari Vanharanta) MB/Ph.D student in Cancer Biology and Bioinformatics, 2018 - 23
Joanna Krupka Cambridge Cancer Centre Clinical Research Fellowship Ph.D. student in Systems Biology, 2017 - 21
Ioana Olan (co-supervision with Prof Masashi Narita) Wellcome Trust Mathematical Genomics in Medicine Ph.D. student in Computational & Systems Biology, 2015 - 18
Masters:
MSc Applied Genomics research students ICL (Katie Taylor, Sathvik Satish and James Spurrier), 2024
MSc Applied Genomics research student ICL (Levia Yee), 2023
M.Phil Computational Biology research student, (Matthew Greenig) U of Cambridge 2021
M.Phil Genomic Medicine research student, (Maria Torra) U of Cambridge 2021
M.Sc Biotechnology research student, (Niklas Müller-Bötticher) ETH Zurich 2020
M.Phil Genomic Medicine research student, (Elsita Jungkurth) U of Cambridge 2020
M.Phil Computational Biology research student, (Laura Martens) U of Cambridge 2019
M.Phil Genomic Medicine research student, (Natalia Pardo Lorente) U of Cambirdge2018-19
M.Eng Information Engineering research student, (Vivian Wong Kah Ong) U of Cambridge 2018
M.Phil Computational Biology research student, (Dilyana Mincheva) U of Cambridge 2015
Interns:
Summer research interns in Data Science, 2015 - 21
Medicine SSC research students, 2018
Summer research students in Computational Systems Biology, University of Cambridge, 2014 - 15
Wellcome Trust Mathematical Genomics in Medicine Ph.D. program rotations, 2015
Supervision of students in BIO21 UROP program in Bioinformatics, Monash University, Australia. 2006 - 08
Mentoring
Personal Tutor for 5 masters students, Imperial College 2022- 23; 2023-24
Postdocs and early career researchers - University of Cambridge, School of Clinical Medicine Mentor Programme 2016 - 18